# SapBase User Guide

## SapBase User Guide

- [SapBase (Sapinaceae Genome DataBase)](https://jiawei-li.gitbook.io/sapbase-user-guide/sapbase-sapinaceae-genome-database.md)
- [Data acquire and analyze methods in SapBase](https://jiawei-li.gitbook.io/sapbase-user-guide/data-acquire-and-analyze-methods-in-sapbase.md)
- [Species Information](https://jiawei-li.gitbook.io/sapbase-user-guide/browse/species-information.md)
- [Genome Browser](https://jiawei-li.gitbook.io/sapbase-user-guide/browse/genome-browser.md): The "Genome Browser" module provides a genome browser for each Sapindaceae species in Sapbase, where users can interactively browse genetic information and transcriptome data.
- [Sapindaceae Phylogeny](https://jiawei-li.gitbook.io/sapbase-user-guide/browse/sapindaceae-phylogeny.md)
- [Meta Search](https://jiawei-li.gitbook.io/sapbase-user-guide/search/meta-search.md)
- [Gene Search](https://jiawei-li.gitbook.io/sapbase-user-guide/search/gene-search.md)
- [Functional Description](https://jiawei-li.gitbook.io/sapbase-user-guide/search/functional-description.md)
- [Domain Search](https://jiawei-li.gitbook.io/sapbase-user-guide/search/domain-search.md)
- [Blast](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/blast.md)
- [ID Mapping](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/id-mapping.md)
- [Gene Expression](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression.md)
- [Multiple Experiment Comparison](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/multiple-experiment-comparison.md)
- [Gene Coexpression](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/gene-coexpression.md)
- [Spatiotemporal Expression in eFP](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/spatiotemporal-expression-in-efp.md)
- [Gene Set Function Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-set-function-analysis.md)
- [Gene Location Viewer](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-location-viewer.md)
- [Synteny Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/synteny-analysis.md)
- [Protein Interaction Prediction](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/protein-interaction-prediction.md)
- [Transcription Factors](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/transcription-factors.md)
- [Pathway Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/pathway-analysis.md)
- [Homolog Find](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/homolog-find.md)
- [sRNA Target Prediction](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/srna-target-prediction.md)
- [Bulk Sequence Fetch](https://jiawei-li.gitbook.io/sapbase-user-guide/download/bulk-sequence-fetch.md)
- [Genomes](https://jiawei-li.gitbook.io/sapbase-user-guide/download/genomes.md)
- [Browse SRA Data](https://jiawei-li.gitbook.io/sapbase-user-guide/download/browse-sra-data.md)