> For the complete documentation index, see [llms.txt](https://jiawei-li.gitbook.io/sapbase-user-guide/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis.md).

# ANALYSIS

- [Blast](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/blast.md)
- [ID Mapping](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/id-mapping.md)
- [Gene Expression](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression.md)
- [Multiple Experiment Comparison](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/multiple-experiment-comparison.md)
- [Gene Coexpression](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/gene-coexpression.md)
- [Spatiotemporal Expression in eFP](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-expression/spatiotemporal-expression-in-efp.md)
- [Gene Set Function Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-set-function-analysis.md)
- [Gene Location Viewer](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/gene-location-viewer.md)
- [Synteny Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/synteny-analysis.md)
- [Protein Interaction Prediction](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/protein-interaction-prediction.md)
- [Transcription Factors](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/transcription-factors.md)
- [Pathway Analysis](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/pathway-analysis.md)
- [Homolog Find](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/homolog-find.md)
- [sRNA Target Prediction](https://jiawei-li.gitbook.io/sapbase-user-guide/analysis/srna-target-prediction.md)